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analysis:fmri:afni [2021/03/10 18:03]
igorkagan [Converting individual (ACPC) monkey brains to NMT]
analysis:fmri:afni [2021/03/17 08:12] (current)
igorkagan [Converting electrode localization prob. maps VMPs from original ACPC space to NMT]
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 igor@alex-Precision-T3610:​~/​VMP_warps$ igor@alex-Precision-T3610:​~/​VMP_warps$
-cp /​mnt/​KognitiveNeurowissenschaften/​DAG/​MRI/​Curius/​2NMT/​vmp/​el_dPul_p.nii .+cp /​mnt/​KognitiveNeurowissenschaften/​DAG/​MRI/​Curius/​2NMT/​electrode_localization/​el_dPul_p.nii .
 3dAllineate -master CU_NMT_Nwarp.nii -1Dmatrix_apply curius_anat_composite_linear_to_template.1D -prefix el_dPul_p -source ​ el_dPul_p.nii 3dAllineate -master CU_NMT_Nwarp.nii -1Dmatrix_apply curius_anat_composite_linear_to_template.1D -prefix el_dPul_p -source ​ el_dPul_p.nii
 3dNwarpApply -nwarp curius_anat_shft_WARP.nii.gz -source el_dPul_p+tlrc.BRIK 3dNwarpApply -nwarp curius_anat_shft_WARP.nii.gz -source el_dPul_p+tlrc.BRIK
 3dAFNItoNIFTI el_dPul_p_Nwarp+tlrc.BRIK 3dAFNItoNIFTI el_dPul_p_Nwarp+tlrc.BRIK
-sudo cp el_dPul_p_Nwarp.nii ​ /​mnt/​KognitiveNeurowissenschaften/​DAG/​MRI/​Curius/​2NMT/​vmp/+sudo cp el_dPul_p_Nwarp.nii ​ /​mnt/​KognitiveNeurowissenschaften/​DAG/​MRI/​Curius/​2NMT/​electrode_localization/
  
 </​code>​ </​code>​
analysis/fmri/afni.txt ยท Last modified: 2021/03/17 08:12 by igorkagan