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analysis:fmri:experimentaldesign [2015/01/28 19:55] – [Tools] kristin.kadukanalysis:fmri:experimentaldesign [2022/12/29 07:15] (current) – external edit 127.0.0.1
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 === Chris Rorden fMRI Simulator === === Chris Rorden fMRI Simulator ===
-http://www.mccauslandcenter.sc.edu/CRNL/tools/fmrisim+http://www.mccauslandcenter.sc.edu/crnl/tools/fmristim
  
 === optseq2 ===  === optseq2 === 
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   * **RSFgen** is a AFNI tool for paradigm design: http://afni.nimh.nih.gov/pub/dist/doc/program_help/RSFgen.html   * **RSFgen** is a AFNI tool for paradigm design: http://afni.nimh.nih.gov/pub/dist/doc/program_help/RSFgen.html
   * **make_random_timing.py** is a AFNI tool to define multiple events, their responses and their time series: http://afni.nimh.nih.gov/pub/dist/doc/program_help/make_random_timing.py.html    * **make_random_timing.py** is a AFNI tool to define multiple events, their responses and their time series: http://afni.nimh.nih.gov/pub/dist/doc/program_help/make_random_timing.py.html 
-  * **3dDeconvolve** is a AFNI tool to evaluate the power of each experimental desgin: http://afni.nimh.nih.gov/pub/dist/doc/program_help/3dDeconvolve.html +  * **3dDeconvolve** is a AFNI tool to evaluate the power of each experimental desgin:  
-http://afni.nimh.nih.gov/pub/dist/edu/latest/afni07_advanced/afni07_advanced.pdf +  * http://afni.nimh.nih.gov/pub/dist/doc/program_help/3dDeconvolve.html 
-{{:analysis:fmri:afni07_advanced.pdf|}}+  http://afni.nimh.nih.gov/pub/dist/edu/latest/afni07_advanced/afni07_advanced.pdf 
 +  * http://afni.nimh.nih.gov/pub/dist/doc/manual/Deconvolvem.pdf 
 +  * http://afni.nimh.nih.gov/pub/dist/edu/latest/afni_handouts/afni17_ht03.pdf 
  
  
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 ===  Multiple Trial Type fMRI (mttfmri) MATLAB Toolbox  === ===  Multiple Trial Type fMRI (mttfmri) MATLAB Toolbox  ===
 http://fmri.ucsd.edu/tliu/mttfmri_toolbox.html http://fmri.ucsd.edu/tliu/mttfmri_toolbox.html
- 
 ===== Theory ===== ===== Theory =====
  
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 Design efficiency in fMRI: http://imaging.mrc-cbu.cam.ac.uk/imaging/DesignEfficiency Design efficiency in fMRI: http://imaging.mrc-cbu.cam.ac.uk/imaging/DesignEfficiency
 +
  
 MIT imaging library (with paper PDFs): http://web.mit.edu/swg/imaginglibrary.htm MIT imaging library (with paper PDFs): http://web.mit.edu/swg/imaginglibrary.htm
 +
  
analysis/fmri/experimentaldesign.1422474920.txt.gz · Last modified: 2022/12/29 07:15 (external edit)