DAG wiki

User Tools

Site Tools

Trace:
contents

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revisionPrevious revision
Next revision		Previous revision
Next revisionBoth sides next revision
contents [2018/10/24 11:41] – [Lab organization] igorkagancontents [2021/12/14 14:04] – restructuring lukas.schneider
Line 18: Line 18:
  
 [[Lab-Organization:Lab-Organization_Zotero_and_GitHub]] [[Lab-Organization:Lab-Organization_Zotero_and_GitHub]]
-===== Logs ===== 
  
-[[Logs:ScanLogs:3T_UMG_scanlog]] 
  
 ===== BrainVoyager ===== ===== BrainVoyager =====
Line 86: Line 84:
  
 [[MATLAB:MATLAB_documentation_guidelines]] [[MATLAB:MATLAB_documentation_guidelines]]
 +
 +[[MATLAB:MATLAB_FieldTrip]]
 +
 +[[MATLAB:MATLAB_PATH]]
 +
 ===== Atlases ===== ===== Atlases =====
  
Line 97: Line 100:
  
 [[References:Zotero_instructions]] [[References:Zotero_instructions]]
- 
-[[References: colormap]] 
 ===== Decision-Making ===== ===== Decision-Making =====
  
Line 138: Line 139:
 ===== ePhys pipeline ===== ===== ePhys pipeline =====
  
-[[ePhys pipeline:Pipeline overview]]+[[ePhys pipeline:1) Pipeline overview]]
  
-[[ePhys pipeline:phys_gui]]+[[ePhys pipeline:2) phys_gui]] 
 + 
 +[[ePhys pipeline:3) Electrode depth file]] 
 + 
 +[[ePhys pipeline:4) waveclus]] 
 + 
 +[[ePhys pipeline:5) plexon]] 
 + 
 +[[ePhys pipeline:6) plx file table]] 
 + 
 +[[ePhys pipeline:7) Same cells file]] 
 + 
 +[[ePhys pipeline:8) Sorted neurons table]]
  
 [[ePhys pipeline:waveclus]] [[ePhys pipeline:waveclus]]
Line 151: Line 164:
  
 [[ePhys pipeline:Dataset convention]] [[ePhys pipeline:Dataset convention]]
 +
 +[[ePhys pipeline:TDT2Plexon]]
  
 [[ePhys pipeline:Spike analysis postprocessing]] [[ePhys pipeline:Spike analysis postprocessing]]
 +
 +
 +
 +===== spike analysis pipeline =====
 +
 +[[spike analysis pipeline:Pipeline overview]]
  
  
Line 184: Line 205:
  
 [[Analysis:Stat:BayesFactor]] [[Analysis:Stat:BayesFactor]]
 +
 ==== fMRI ==== ==== fMRI ====
  
Line 193: Line 215:
  
 [[Analysis:fMRI:SNR]] [[Analysis:fMRI:SNR]]
 +
 +[[Analysis:fMRI:AFNI]]
  
 ==== Spectral ==== ==== Spectral ====
contents.txt · Last modified: 2023/11/13 17:09 by i.kagan