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contents [2022/01/11 13:03] – [ePhys pipeline] lukas.schneidercontents [2023/11/13 17:09] (current) – [spike analysis pipeline] i.kagan
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 ===== Monkeypsych ===== ===== Monkeypsych =====
 +
 +
 +[[Monkeypsych:Data_parameters]]
  
 [[Monkeypsych:Monkeypsych_installation]] [[Monkeypsych:Monkeypsych_installation]]
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 [[Git:Git_Resources]] [[Git:Git_Resources]]
 +
 +[[Git:DAG_git_general_ideas]]
  
 ===== Links ===== ===== Links =====
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 [[ePhys pipeline:1) Pipeline overview]] [[ePhys pipeline:1) Pipeline overview]]
  
-[[ePhys pipeline:2) phys_gui]]+[[ePhys pipeline:2) Synchronization]]
  
-[[ePhys pipeline:3) Sorting]]+[[ePhys pipeline:3) phys_gui]]
  
-[[ePhys pipeline:4) Meta-info]]+[[ePhys pipeline:4) Sorting]]
  
-[[ePhys pipeline:5) TDT Trial structure]]+[[ePhys pipeline:5) Meta-info]]
  
-[[ePhys pipeline:6) Synchronization]]+[[ePhys pipeline:6) TDT Trial structure]]
  
-[[ePhys pipeline:3) Electrode depth file]]+[[ePhys pipeline:7) ToDo]]
  
-[[ePhys pipeline:4) waveclus]]+[[ePhys pipeline:8) External links]]
  
-[[ePhys pipeline:5) plexon]] 
  
-[[ePhys pipeline:6) plx file table]] 
  
-[[ePhys pipeline:7) Same cells file]] 
  
-[[ePhys pipeline:8) Sorted neurons table]]+===== spike analysis pipeline =====
  
-[[ePhys pipeline:waveclus]]+[[spike analysis pipeline:Pipeline overview]]
  
-[[ePhys pipeline:Electrode depth file]]+[[spike analysis pipeline:Interaction with other pipelines]]
  
-[[ePhys pipeline:Same cells file]]+[[spike analysis pipeline:Keys]]
  
-[[ePhys pipeline:Excel table]]+[[spike analysis pipeline:Defining conditions]]
  
-[[ePhys pipeline:Dataset convention]]+[[spike analysis pipeline:Space definition]]
  
-[[ePhys pipeline:TDT2Plexon]]+[[spike analysis pipeline:Statistics and tuning table]]
  
-[[ePhys pipeline:Spike analysis postprocessing]]+[[spike analysis pipeline:Population matfile format]]
  
 +[[spike analysis pipeline:Population analysis:Population PSTHs]]
  
- 
-===== spike analysis pipeline ===== 
- 
-[[spike analysis pipeline:Pipeline overview]] 
  
  
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 [[3DReco:angled_chamber_pipeline]] [[3DReco:angled_chamber_pipeline]]
 +
 +===== MRI =====
 +
 +[[MRI:PhysioMonitoring]]
 +
 +===== waveclus =====
 +
 +[[waveclus:output variables]]
 +
  
  
contents.1641906194.txt.gz · Last modified: 2022/12/29 07:15 (external edit)