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neuroelf:neuroelf_resources [2015/08/15 21:23] igorkaganneuroelf:neuroelf_resources [2022/12/29 07:15] (current) – external edit 127.0.0.1
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 ===== DAG installation notes ===== ===== DAG installation notes =====
  
-1) During installation, disable (remove from path) Chronux: conflict with linec.m +1) During installation, disable (remove from path) Chronux (if present): conflict with linec.m 
  
 2) NeuroElf functions use std.m and var.m as in newer versions of MATLAB, with 3 inputs: e.g. Y = STD(X,FLAG,DIM). 2) NeuroElf functions use std.m and var.m as in newer versions of MATLAB, with 3 inputs: e.g. Y = STD(X,FLAG,DIM).
-Therefore, NaN toolbox functions std.m and var.m are incompatible, remove it from path. Revise sterr.m and corrcoef_eval.m and place to Igtools.+Therefore, old NaN toolbox functions std.m and var.m were incompatible and sterr.m was updated. The old version of std.m is now available as ig_std.m in Igtools (corrcoef_eval.m has not been revised yet but is not needed for running the pipeline).
  
 3) Starting from NeuroElf_v09d, many useful auxiliary scripts/functions are "hidden" behind @neuroelf method, 3) Starting from NeuroElf_v09d, many useful auxiliary scripts/functions are "hidden" behind @neuroelf method,
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 </code> </code>
  
-The functions below should be in the NeuroElf base (root) folder (e.g. D:\Sources\NeuroElf_v10_4503). **Only** this folder should be on the path!+:-O The functions below should be in the NeuroElf base (root) folder (e.g. D:\Sources\NeuroElf_v10_4503). **Only** this folder should be on the path!
  
 {{:neuroelf:neuroelf_base_folder_ikdag20150815.png?600|}} {{:neuroelf:neuroelf_base_folder_ikdag20150815.png?600|}}
- 
-Currently required functions for DAG NeuroElf-based functions (\Sources\MATLAB\bv_umg): 
-  * findfiles 
-  * checkstruct 
-  * renamefile 
-Used by ne_pl_fmriqasheet.m: 
-  * psctrans 
-  * packmosaic 
-  * scaledata 
-  * minmaxmean 
-  * splittocell 
  
 4)  There is a bug in NeuroElf v1.0 and v0.9d, to fix please replace the function dcm_Value.m in /xff/private with the function below. This function is used by createfmr.m 4)  There is a bug in NeuroElf v1.0 and v0.9d, to fix please replace the function dcm_Value.m in /xff/private with the function below. This function is used by createfmr.m
neuroelf/neuroelf_resources.1439673790.txt.gz · Last modified: 2022/12/29 07:15 (external edit)