Differences

This shows you the differences between two versions of the page.

--- ephys_pipeline:5_meta-info [2022/03/17 14:26] – [sorted_neurons table] lukas.schneider
+++ ephys_pipeline:5_meta-info [2022/12/29 07:15] (current) – external edit 127.0.0.1
@@ Line 49: / Line 49: @@
   * Block: ephys recording block
   * Chan: electrode number (channel)
-  * z: Electrode depth (from guide tube tip) - taken from [[ephys_pipeline:electrode_depth_file|electrode depth file]]
+  * z: Electrode depth (from guide tube tip) - taken from [[ephys_pipeline:5_Meta-info#electrode_depths file|Electrode depths file]]
   * Unit: sortcode assigned to this cell (a=first,b=second,...)
   * N_spk: Total spike count
-  * Neuron_ID: Cell identifier (the [[ephys_pipeline:same_cells_file|same cell]] can be recorded in several blocks !)
+  * Neuron_ID: Cell identifier (the [[ephys_pipeline:5_Meta-info#same_cells file|Same cells file]] can be recorded in several blocks !)
   * Site_ID: LFP site identifier (Based on electrode depth, same site can be recorded in different blocks and at the same time with different units)
   * Times_same_unit: For identifying unique units
@@ Line 67: / Line 67: @@
 The other entries typically don't change within a session and can be taken from the handwritten log (notes taken during recording, to be found in Y:\Logs\Phys
-  * Set: Dataset, relevant for assigning to specific project (see [[ephys_pipeline:dataset_convention|dataset convention]])
+  * Set: Dataset, relevant for assigning to specific project (see [[ephys_pipeline:5_Meta-info#dataset_convention|dataset_convention]]
   * Target: Area
   * Hemisphere: left/right
@@ Line 117: / Line 117: @@
 ===== automatic processing logs =====
+Every time you run phys_gui_execute, two new files will be created in Y:\Data\All_phys_preprocessing_log\Monkey_phys
+  - attempted_YYYYMMDD-hhmm - stored settings before any execution
+  - executed_YYYYMMDD-hhmm  - stored settings after running the entire execution (successfully)
+This allows to track what processing has been performed, and in case of unsuccessful completion recover the intended settings. Settings stored contain the entire handles structure (specifically including LFP filter information as well as waveclus settings)